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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
Assay category
42
DNA binding
Target of assay
289
transcription factor
108
control
103
histone modification
102
histone
66
recombinant protein
60
narrow histone mark
42
broad histone mark
39
RNA binding protein
18
chromatin remodeller
2
other context
2
other post-translational modification
Date released
19
August, 2017
10
December, 2017
8
November, 2017
3
October, 2019
2
August, 2021
Available data
30
bigWig
29
bam
29
bed narrowPeak
25
fastq
21
bigBed narrowPeak
18
tagAlign
8
bed broadPeak
8
bigBed broadPeak
1
bed bed3+
Organism
42
Homo sapiens
Biosample type
25
tissue
9
cell line
7
in vitro differentiated cells
1
primary cell
Organ
78
pancreas
70
brain
57
heart
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
42
liver
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
Project
42
AMP
Genome assembly (visualization)
30
hg19
28
GRCh38
Lab
41
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
6
inconsistent control read length
assay_title!
GRO-seq
month_released!
November, 2018
BIOSAMPLE
ASSAY
42 results
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ChIP-seq
tissue
liver
22
right lobe of liver
3
cell line
HepG2
9
in vitro differentiated cells
hepatocyte
7
primary cell
hepatocyte
1
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