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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
DNase-seq
31
ChIP-seq
7
ATAC-seq
Hi-C
2
total RNA-seq
1
WGBS
Assay category
41
DNA accessibility
31
DNA binding
2
Transcription
1
DNA methylation
Target of assay
25
histone
25
histone modification
18
broad histone mark
7
narrow histone mark
6
control
Date released
32
June, 2019
27
October, 2019
7
May, 2019
6
February, 2021
2
February, 2020
1
July, 2019
Available data
72
bam
65
bed narrowPeak
60
bigWig
58
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
2
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
75
Homo sapiens
Biosample type
75
tissue
Organ
935
pancreas
785
liver
682
connective tissue
510
epithelium
491
adipose tissue
388
heart
349
kidney
281
brain
230
vasculature
225
blood vessel
159
bone element
141
artery
118
limb
85
musculature of body
69
blood
69
bodily fluid
60
eye
nerve
37
embryo
25
spleen
20
lung
20
vein
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
75
AMP
Genome assembly (visualization)
65
GRCh38
65
hg19
Lab
75
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
Hi-C
RRBS
shRNA RNA-seq
organ_slims!
nerve
BIOSAMPLE
ASSAY
75 results
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DNase-seq
ChIP-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial artery
2
23
1
1
muscle of leg
13
7
1
muscle of arm
17
distal epiphysis of femur
1
distal epiphysis of humerus
1
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