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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
34
single cell RNA-seq
27
snATAC-seq
10
ATAC-seq
6
WGBS
Assay category
224
Transcription
37
DNA accessibility
6
DNA methylation
Date released
76
February, 2023
51
May, 2021
45
February, 2021
45
May, 2020
41
September, 2020
7
August, 2020
2
March, 2020
Available data
196
bigWig
186
bam
169
fastq
153
zippedFastqFolder
104
tsv
88
bed narrowPeak
84
tagAlign
Organism
267
Homo sapiens
Biosample type
265
primary cell
2
cell line
Organ
71
epithelium
71
pancreas
Project
AMP
169
HPAP
98
T1D
Genome assembly (visualization)
108
GRCh38
98
hg19
Lab
169
Klaus Kaestner, Upenn
96
Kyle Gaulton, UCSD
2
AMP-T2D consortium
Audit category:
27
audit script error
6
inconsistent ontology term
assay_title!
Hi-C
STARR-seq
award.project!
AMP
BIOSAMPLE
ASSAY
267 results
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total RNA-seq
single cell RNA-seq
snATAC-seq
ATAC-seq
WGBS
primary cell
Langerhans cell
34
27
pancreatic alpha cell
42
7
6
monocyte
53
exocrine cell
39
pancreatic beta cell
11
3
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cell line
EndoC_BH1
2
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