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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
36
DNase-seq
7
total RNA-seq
Hi-C
2
ATAC-seq
WGBS
Assay category
66
DNA binding
38
DNA accessibility
7
Transcription
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
69
October, 2019
32
June, 2019
7
May, 2019
February, 2021
3
February, 2020
Available data
107
bam
90
bigWig
86
bed narrowPeak
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
Organism
111
Homo sapiens
Biosample type
111
tissue
Organ
860
pancreas
779
liver
443
epithelium
345
kidney
316
heart
283
brain
222
connective tissue
163
vasculature
157
blood vessel
111
limb
99
adipose tissue
89
musculature of body
75
artery
69
blood
69
bodily fluid
61
eye
43
nerve
embryo
23
spleen
20
lung
20
vein
18
ureter
9
bone element
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
111
AMP
Genome assembly (visualization)
90
hg19
89
GRCh38
Lab
111
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
Hi-C
WGBS
month_released!
February, 2021
organ_slims!
embryo
BIOSAMPLE
ASSAY
111 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
tissue
tibial nerve
35
2
5
1
tibial artery
23
2
1
1
muscle of leg
7
13
muscle of arm
17
forelimb muscle
1
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