Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
Hi-C
total RNA-seq
5
RRBS
2
small RNA-seq
1
ATAC-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
1
snATAC-seq
Assay category
29
DNA binding
6
DNA methylation
3
Transcription
2
DNA accessibility
Target of assay
25
histone
25
histone modification
16
broad histone mark
9
narrow histone mark
4
control
Date released
June, 2019
26
August, 2017
7
May, 2019
4
July, 2019
2
May, 2022
1
January, 2018
1
March, 2020
Available data
23
bigWig
19
bed narrowPeak
15
tagAlign
13
bed broadPeak
10
bam
6
bigBed narrowPeak
4
bed bedMethyl
4
bigBed bedMethyl
3
tsv
2
fastq
1
bed bed3+
1
txt
Organism
41
Homo sapiens
Biosample type
39
tissue
2
primary cell
Organ
596
liver
536
pancreas
365
epithelium
283
heart
236
brain
212
kidney
191
connective tissue
163
vasculature
159
blood vessel
97
bone element
92
adipose tissue
83
artery
79
limb
69
blood
69
bodily fluid
41
musculature of body
38
nerve
35
eye
25
spleen
23
embryo
20
lung
20
vein
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
41
AMP
Genome assembly (visualization)
26
hg19
8
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
Hi-C
total RNA-seq
month_released!
June, 2019
BIOSAMPLE
ASSAY
41 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
RRBS
small RNA-seq
ATAC-seq
WGBS
pCHi-C
single cell RNA-seq
snATAC-seq
tissue
skeletal muscle tissue
22
4
1
1
1
1
muscle of leg
7
1
psoas muscle
1
primary cell
skeletal muscle cell
1
skeletal muscle satellite cell
1
Download