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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
8
snATAC-seq
2
WGBS
1
pCHi-C
Assay category
14
DNA binding
8
DNA accessibility
2
DNA methylation
Target of assay
14
control
Date released
8
January, 2021
8
November, 2018
4
December, 2018
4
January, 2019
1
March, 2020
Available data
16
bam
16
fastq
2
bed bedMethyl
2
bigBed bedMethyl
2
bigWig
1
tsv
Organism
25
Homo sapiens
Biosample type
11
tissue
8
primary cell
6
cell line
Organ
287
pancreas
225
kidney
213
epithelium
205
heart
165
liver
122
brain
95
connective tissue
89
bone element
71
blood vessel
71
vasculature
65
adipose tissue
48
artery
27
eye
22
limb
20
lung
19
musculature of body
14
blood
14
bodily fluid
12
nerve
11
spleen
8
embryo
5
gonad
5
ovary
5
vein
4
skeleton
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
17
AMP
8
T1D
Genome assembly (visualization)
70
GRCh38
hg19
Lab
17
AMP-T2D consortium
8
Kyle Gaulton, UCSD
assay_title!
Hi-C
assembly!
hg19
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
25 results
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Clear Filters
ChIP-seq
snATAC-seq
WGBS
pCHi-C
tissue
spleen
8
2
1
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
6
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