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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
total RNA-seq
Hi-C
4
ATAC-seq
2
pCHi-C
Assay category
13
Transcription
4
DNA accessibility
Target of assay
3
histone
histone modification
3
narrow histone mark
Date released
574
February, 2021
257
November, 2017
233
May, 2020
200
May, 2021
168
June, 2019
164
July, 2018
153
August, 2017
87
July, 2019
71
November, 2018
49
April, 2018
47
December, 2017
47
November, 2019
45
February, 2023
41
October, 2019
40
August, 2021
40
September, 2018
39
May, 2022
30
December, 2018
19
January, 2019
19
March, 2020
17
October, 2018
15
February, 2018
7
October, 2017
7
September, 2017
6
November, 2020
5
April, 2019
5
December, 2019
5
May, 2019
3
August, 2018
3
January, 2018
3
June, 2018
2
March, 2019
1
May, 2023
Available data
17
bigWig
15
tsv
13
bam
2
bedpe bed3+
2
ibed
Organism
19
Homo sapiens
Biosample type
9
tissue
6
cell line
4
in vitro differentiated cells
Organ
7
pancreas
4
epithelium
2
heart
2
musculature of body
1
blood vessel
1
liver
1
vasculature
Project
17
AMP
2
T1D
Genome assembly (visualization)
19
hg19
13
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
Hi-C
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
19 results
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total RNA-seq
ATAC-seq
pCHi-C
tissue
islet of Langerhans
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
cell line
EndoC_BH1
2
2
early embryonic cell
2
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
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