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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
16
small RNA-seq
13
RRBS
12
WGBS
Hi-C
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
61
Transcription
25
DNA methylation
8
DNA accessibility
Target of assay
3
control
Date released
682
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
313
August, 2021
292
October, 2019
223
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
96
May, 2022
94
December, 2017
94
July, 2019
81
November, 2018
80
April, 2019
47
September, 2023
41
March, 2020
40
May, 2024
40
September, 2020
39
February, 2018
34
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
4
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
78
bam
77
bigWig
61
tsv
21
bed bedMethyl
21
bigBed bedMethyl
7
bed narrowPeak
2
bigBed narrowPeak
Organism
94
Homo sapiens
Biosample type
67
tissue
27
primary cell
Organ
25
heart
17
connective tissue
15
brain
12
adipose tissue
11
epithelium
11
kidney
10
vasculature
9
blood vessel
9
liver
6
musculature of body
pancreas
3
artery
2
pericardium
1
eye
1
limb
Project
94
AMP
Genome assembly (visualization)
81
hg19
75
GRCh38
Lab
94
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
Hi-C
audit.ERROR.category!
inconsistent replicate
organ_slims!
pancreas
BIOSAMPLE
ASSAY
94 results
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total RNA-seq
small RNA-seq
RRBS
WGBS
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
heart left ventricle
2
1
4
2
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
heart
2
1
1
+ See 22 more…
primary cell
cerebellar granule cell
2
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
mesenchymal stem cell of adipose
1
1
renal cortical epithelial cell
1
1
+ See 16 more…
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