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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
snATAC-seq
Hi-C
2
RNA microarray
2
single cell RNA-seq
Assay category
29
DNA accessibility
2
Transcription
Date released
27
February, 2021
4
December, 2019
1
August, 2022
1
May, 2022
Available data
27
fastq
9
tsv
6
txt
csv
1
bed bed3+
Organism
33
Homo sapiens
Biosample type
27
primary cell
4
tissue
2
in vitro differentiated cells
Organ
2
kidney
1
epithelium
1
musculature of body
1
pancreas
Project
27
HPAP
6
AMP
Genome assembly (visualization)
1
hg19
Lab
27
Klaus Kaestner, Upenn
6
AMP-T2D consortium
Audit category:
264
inconsistent ontology term
33
audit script error
28
inconsistent control
inconsistent replicate
assay_title!
Hi-C
audit.ERROR.category!
inconsistent replicate
files.file_type!
csv
organ_slims!
bone element
BIOSAMPLE
ASSAY
33 results
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snATAC-seq
RNA microarray
single cell RNA-seq
primary cell
Langerhans cell
27
tissue
islet of Langerhans
1
kidney interstitium
1
renal glomerulus
1
skeletal muscle tissue
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
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