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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
Assay category
74
DNA binding
Target of assay
50
histone
50
histone modification
27
narrow histone mark
24
transcription factor
23
broad histone mark
1
RNA binding protein
1
recombinant protein
Date released
39
August, 2017
32
September, 2018
1
December, 2017
1
November, 2018
1
October, 2017
Available data
89
fastq
88
bam
86
bigWig
48
bed narrowPeak
bigBed narrowPeak
14
bed bed3+
4
tagAlign
2
bed broadPeak
Organism
74
Homo sapiens
Biosample type
44
primary cell
23
tissue
6
in vitro differentiated cells
1
cell line
Organ
54
pancreas
21
epithelium
17
connective tissue
12
adipose tissue
1
brain
1
embryo
1
liver
Project
74
AMP
Genome assembly (visualization)
71
GRCh38
71
hg19
Lab
74
AMP-T2D consortium
Audit category:
74
missing controlled_by
assay_title!
Hi-C
files.file_type!
bigBed narrowPeak
lab.title!
Mark McCarthy, Oxford
BIOSAMPLE
ASSAY
74 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
brain
1
in vitro differentiated cells
adipocyte
5
pancreatic endoderm
1
cell line
HepG2
1
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