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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
31
total RNA-seq
16
small RNA-seq
12
WGBS
6
ATAC-seq
6
RRBS
Hi-C
2
FAIRE-seq
Assay category
47
Transcription
34
DNA binding
18
DNA methylation
8
DNA accessibility
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
667
February, 2021
397
November, 2017
352
August, 2017
312
August, 2021
276
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
73
July, 2019
66
May, 2022
59
November, 2019
54
March, 2020
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
4
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
98
bam
93
bigWig
47
tsv
37
bed narrowPeak
34
fastq
32
bigBed narrowPeak
14
bed bedMethyl
14
bigBed bedMethyl
Organism
107
Homo sapiens
Biosample type
80
tissue
27
cell line
primary cell
Organ
27
blood
27
bodily fluid
20
heart
11
brain
10
adipose tissue
10
connective tissue
8
liver
7
blood vessel
7
spleen
7
vasculature
6
pancreas
4
kidney
3
musculature of body
1
artery
1
limb
1
pericardium
Project
107
AMP
Genome assembly (visualization)
91
GRCh38
90
hg19
Lab
107
AMP-T2D consortium
Audit category:
1
inconsistent control
assay_title!
Hi-C
biosample_type!
primary cell
BIOSAMPLE
ASSAY
107 results
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Clear Filters
ChIP-seq
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
RRBS
FAIRE-seq
tissue
heart left ventricle
2
4
2
1
spleen
7
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
+ See 26 more…
cell line
GM12878
27
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