Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ChIP-seq
Hi-C
2
total RNA-seq
1
FAIRE-seq
1
RRBS
Assay category
17
DNA binding
2
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
13
histone
13
histone modification
7
broad histone mark
6
narrow histone mark
4
control
Date released
16
October, 2019
3
July, 2019
2
November, 2017
Available data
32
bam
27
bigWig
21
bed narrowPeak
21
bigBed narrowPeak
bed broadPeak
12
bigBed broadPeak
6
bed bed3+
6
fastq
2
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
21
Homo sapiens
Biosample type
127
tissue
66
cell line
21
primary cell
Organ
377
epithelium
343
pancreas
32
connective tissue
26
kidney
21
vasculature
19
blood vessel
16
vein
13
musculature of body
11
liver
10
heart
8
blood
8
bodily fluid
7
brain
4
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
21
AMP
Genome assembly (visualization)
16
hg19
12
GRCh38
Lab
21
AMP-T2D consortium
assay_title!
Hi-C
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
21 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
FAIRE-seq
RRBS
primary cell
endothelial cell of umbilical vein
15
1
choroid plexus epithelial cell
1
1
brain microvascular endothelial cell
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
Download