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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
3
DNase-seq
Hi-C
1
FAIRE-seq
1
RRBS
1
small RNA-seq
1
total RNA-seq
Assay category
27
DNA binding
4
DNA accessibility
2
Transcription
1
DNA methylation
Target of assay
23
histone
23
histone modification
13
broad histone mark
10
narrow histone mark
4
control
Date released
20
October, 2019
11
June, 2019
3
July, 2019
Available data
33
bam
26
bigWig
22
bed narrowPeak
22
bigBed narrowPeak
5
bed broadPeak
5
bigBed broadPeak
3
bed bed3+
2
tsv
1
bed bedMethyl
1
bigBed bedMethyl
1
tar
Organism
34
Homo sapiens
Biosample type
76
tissue
34
primary cell
Organ
399
epithelium
343
pancreas
38
connective tissue
36
kidney
33
vasculature
27
blood vessel
20
vein
18
brain
14
musculature of body
13
heart
13
liver
8
blood
8
bodily fluid
5
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
34
AMP
Genome assembly (visualization)
27
hg19
23
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
Hi-C
BIOSAMPLE
ASSAY
34 results
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ChIP-seq
DNase-seq
FAIRE-seq
RRBS
small RNA-seq
total RNA-seq
primary cell
endothelial cell of umbilical vein
17
2
1
skeletal muscle satellite cell
8
1
1
skeletal muscle cell
2
1
1
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