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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ChIP-seq
5
total RNA-seq
3
DNase-seq
2
ATAC-seq
1
pCHi-C
Assay category
55
DNA binding
5
DNA accessibility
5
Transcription
Target of assay
30
histone
30
histone modification
20
broad histone mark
19
control
10
narrow histone mark
6
transcription factor
3
other context
3
other post-translational modification
Date released
42
October, 2019
7
December, 2018
7
January, 2019
7
November, 2018
1
February, 2020
1
March, 2020
1
October, 2017
Available data
66
bam
47
bigWig
41
bed narrowPeak
39
bigBed narrowPeak
24
fastq
6
tsv
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
2
bed bedMethyl
bigBed bedMethyl
Organism
66
Homo sapiens
Biosample type
66
tissue
Organ
928
pancreas
750
liver
675
connective tissue
504
epithelium
488
adipose tissue
290
heart
281
brain
223
vasculature
220
kidney
218
blood vessel
159
bone element
139
artery
117
limb
86
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
29
embryo
23
spleen
20
lung
20
vein
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
66
AMP
Genome assembly (visualization)
45
GRCh38
45
hg19
Lab
66
AMP-T2D consortium
assay_title!
Hi-C
files.file_type!
bigBed bedMethyl
month_released!
August, 2021
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
total RNA-seq
DNase-seq
ATAC-seq
pCHi-C
tissue
tibial nerve
35
5
2
1
spleen
20
1
1
1
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