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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ChIP-seq
15
RRBS
12
WGBS
Hi-C
6
ATAC-seq
2
FAIRE-seq
Assay category
74
DNA binding
27
DNA methylation
8
DNA accessibility
Target of assay
30
histone
30
histone modification
29
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
406
November, 2017
322
August, 2017
293
October, 2019
226
May, 2021
218
June, 2019
200
May, 2022
193
August, 2021
189
February, 2023
156
February, 2021
152
May, 2020
120
May, 2019
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
59
September, 2020
47
September, 2018
47
September, 2023
40
May, 2024
39
November, 2019
35
July, 2019
34
December, 2018
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
12
November, 2020
11
September, 2017
9
March, 2020
8
January, 2018
7
August, 2020
4
July, 2018
4
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
December, 2019
1
October, 2022
Available data
158
bam
128
bigWig
tsv
60
fastq
52
bed narrowPeak
47
bigBed narrowPeak
23
bed bedMethyl
23
bigBed bedMethyl
Organism
109
Homo sapiens
Biosample type
100
tissue
9
primary cell
Organ
53
pancreas
24
connective tissue
23
adipose tissue
14
heart
6
epithelium
5
kidney
5
vasculature
4
blood vessel
4
brain
2
liver
2
musculature of body
1
artery
1
eye
1
limb
1
pericardium
Project
109
AMP
Genome assembly (visualization)
67
hg19
59
GRCh38
Lab
109
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_title!
Hi-C
files.file_type!
tsv
month_released!
January, 2019
BIOSAMPLE
ASSAY
109 results
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Clear Filters
ChIP-seq
RRBS
WGBS
ATAC-seq
FAIRE-seq
tissue
body of pancreas
33
endocrine pancreas
16
subcutaneous adipose tissue
12
omental fat pad
11
heart left ventricle
1
4
2
+ See 16 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
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