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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
9
DNase-seq
7
ATAC-seq
7
WGBS
1
FAIRE-seq
Assay category
78
DNA binding
17
DNA accessibility
7
DNA methylation
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
8
control
7
chromatin remodeller
6
histone
6
histone modification
5
broad histone mark
3
other context
3
other post-translational modification
1
narrow histone mark
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
105
fastq
102
bam
94
bigWig
85
bed narrowPeak
79
bigBed narrowPeak
14
tagAlign
13
bed broadPeak
9
bed bed3+
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
102
Homo sapiens
Biosample type
61
cell line
41
tissue
Organ
53
liver
15
blood
15
bodily fluid
11
brain
11
pancreas
10
spleen
2
adipose tissue
2
connective tissue
Project
102
AMP
Genome assembly (visualization)
92
GRCh38
83
hg19
Lab
102
AMP-T2D consortium
Audit category:
6
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
Hi-C
BIOSAMPLE
ASSAY
102 results
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Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
WGBS
FAIRE-seq
cell line
HepG2
45
1
GM12878
15
tissue
brain
8
2
spleen
6
1
1
2
body of pancreas
2
4
2
liver
4
2
pancreas
2
1
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