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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
DNase-seq
3
ChIP-seq
Hi-C
Assay category
16
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
2
narrow histone mark
1
broad histone mark
Date released
14
June, 2019
3
August, 2021
2
October, 2019
Available data
317
bam
299
bigWig
257
fastq
156
tsv
151
bed narrowPeak
80
zippedFastqFolder
76
bigBed narrowPeak
22
bed broadPeak
22
bigBed broadPeak
19
bed bed3+
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
1
tar
0
bed bedgraph
Organism
19
Homo sapiens
Biosample type
19
primary cell
Organ
78
kidney
36
limb
34
musculature of body
32
brain
30
connective tissue
30
heart
28
pancreas
19
epithelium
18
ureter
12
liver
11
vasculature
9
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
19
AMP
Genome assembly (visualization)
19
GRCh38
13
hg19
Lab
19
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
Hi-C
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
19 results
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DNase-seq
ChIP-seq
primary cell
hepatocyte
1
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
brain microvascular endothelial cell
1
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