Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
total RNA-seq
27
snATAC-seq
12
single cell RNA-seq
7
ATAC-seq
6
WGBS
Hi-C
Assay category
88
Transcription
34
DNA accessibility
6
DNA methylation
Date released
May, 2022
76
February, 2023
September, 2020
45
February, 2021
7
August, 2020
Available data
128
fastq
7
bigWig
6
tsv
Organism
128
Homo sapiens
Biosample type
128
primary cell
Organ
50
epithelium
50
pancreas
Project
128
HPAP
Genome assembly (visualization)
7
GRCh38
Lab
3884
AMP-T2D consortium
319
Kyle Gaulton, UCSD
141
Katalin Susztak, Upenn
128
Klaus Kaestner, Upenn
47
KPMP
40
Patrick T. Ellinor, Broad
35
Bing Ren, UCSD
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
Mark McCarthy, Oxford
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
27
audit script error
assay_title!
Hi-C
lab.title!
Mark McCarthy, Oxford
month_released!
May, 2022
September, 2020
BIOSAMPLE
ASSAY
128 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
snATAC-seq
single cell RNA-seq
ATAC-seq
WGBS
primary cell
Langerhans cell
27
12
exocrine cell
39
pancreatic alpha cell
27
5
6
pancreatic beta cell
10
2
Download