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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ChIP-seq
36
DNase-seq
8
ATAC-seq
7
total RNA-seq
Hi-C
1
WGBS
Assay category
66
DNA binding
44
DNA accessibility
7
Transcription
1
DNA methylation
Target of assay
49
histone
49
histone modification
34
broad histone mark
17
control
15
narrow histone mark
Date released
69
October, 2019
32
June, 2019
7
May, 2019
6
February, 2021
3
February, 2020
1
July, 2019
Available data
114
bam
92
bed narrowPeak
91
bigWig
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
118
Homo sapiens
Biosample type
118
tissue
Organ
934
pancreas
753
liver
678
connective tissue
510
epithelium
adipose tissue
298
heart
283
brain
225
vasculature
224
kidney
219
blood vessel
159
bone element
139
artery
118
limb
90
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
29
embryo
25
spleen
20
lung
20
vein
18
ureter
16
skeleton
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
118
AMP
Genome assembly (visualization)
96
GRCh38
96
hg19
Lab
118
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
Hi-C
month_released!
August, 2021
organ_slims!
adipose tissue
gonad
BIOSAMPLE
ASSAY
118 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial nerve
35
2
1
5
tibial artery
23
2
1
1
muscle of leg
7
13
1
muscle of arm
17
distal epiphysis of femur
1
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