Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
13
ATAC-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
21
DNA binding
13
DNA accessibility
3
Transcription
Target of assay
12
histone
12
histone modification
10
broad histone mark
9
control
2
narrow histone mark
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
316
August, 2021
309
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
100
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
59
November, 2019
59
September, 2020
54
March, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
34
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
4
August, 2018
4
March, 2019
4
March, 2023
3
June, 2018
1
August, 2022
1
October, 2022
Available data
32
fastq
29
bam
22
bigWig
17
bed narrowPeak
14
tagAlign
11
bigBed narrowPeak
4
bed broadPeak
3
tsv
2
bed bed3+
1
bedpe bed3+
Organism
38
Homo sapiens
Biosample type
29
tissue
8
primary cell
1
in vitro differentiated cells
Organ
19
pancreas
16
brain
8
epithelium
2
adipose tissue
2
connective tissue
1
spleen
Project
38
AMP
Genome assembly (visualization)
24
GRCh38
23
hg19
Lab
37
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
missing controlled_by
assay_title!
Hi-C
BIOSAMPLE
ASSAY
38 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
pCHi-C
tissue
brain
15
islet of Langerhans
6
1
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
+ See 1 more…
primary cell
pancreatic alpha cell
2
2
pancreatic acinar cell
1
1
pancreatic beta cell
2
in vitro differentiated cells
white fat cell
1
See all biosamples
Download