Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
DNase-seq
4
small RNA-seq
4
total RNA-seq
Hi-C
3
single cell RNA-seq
2
RRBS
1
ATAC-seq
1
FAIRE-seq
Assay category
32
DNA accessibility
11
Transcription
2
DNA methylation
Target of assay
3
control
Date released
91
November, 2017
86
October, 2019
30
June, 2019
28
May, 2019
16
October, 2017
15
July, 2019
12
February, 2020
2
March, 2020
2
November, 2018
1
February, 2023
Available data
43
bam
43
bigWig
31
bed narrowPeak
31
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
11
tsv
2
bed bedMethyl
2
bigBed bedMethyl
Organism
45
Homo sapiens
Biosample type
36
tissue
9
primary cell
Organ
92
kidney
60
heart
49
musculature of body
45
brain
35
connective tissue
33
limb
31
epithelium
18
ureter
17
vasculature
14
blood vessel
13
adipose tissue
11
liver
10
pancreas
8
eye
5
artery
2
pericardium
Project
45
AMP
Genome assembly (visualization)
42
GRCh38
34
hg19
Lab
45
AMP-T2D consortium
assay_title!
Hi-C
BIOSAMPLE
ASSAY
45 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
small RNA-seq
total RNA-seq
single cell RNA-seq
RRBS
ATAC-seq
FAIRE-seq
tissue
brain
12
1
frontal cortex
2
1
1
1
cerebellum (Hemisphere)
1
1
diencephalon
1
1
temporal lobe
1
1
+ See 12 more…
primary cell
cerebellar granule cell
2
choroid plexus epithelial cell
1
1
Purkinje cell
1
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 2 more…
See all biosamples
Download