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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
3
DNase-seq
Hi-C
2
WGBS
1
ATAC-seq
1
FAIRE-seq
1
pCHi-C
Assay category
31
DNA binding
5
DNA accessibility
2
DNA methylation
Target of assay
21
histone
21
histone modification
13
broad histone mark
10
control
8
narrow histone mark
transcription factor
3
other context
3
other post-translational modification
Date released
20
October, 2019
7
January, 2019
6
November, 2018
4
December, 2018
1
March, 2020
1
October, 2017
Available data
38
bam
25
bigWig
21
bed narrowPeak
20
bigBed narrowPeak
18
fastq
5
bed broadPeak
5
bigBed broadPeak
3
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
1
tar
1
tsv
Organism
39
Homo sapiens
Biosample type
20
primary cell
19
tissue
Organ
918
pancreas
643
connective tissue
507
epithelium
474
adipose tissue
446
liver
373
heart
343
kidney
280
brain
222
vasculature
217
blood vessel
159
bone element
136
artery
118
limb
90
musculature of body
60
eye
43
nerve
34
embryo
20
lung
20
vein
19
spleen
18
ureter
16
blood
16
bodily fluid
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
39
AMP
Genome assembly (visualization)
23
hg19
22
GRCh38
Lab
39
AMP-T2D consortium
assay_title!
Hi-C
target.investigated_as!
RNA binding protein
transcription factor
BIOSAMPLE
ASSAY
39 results
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ChIP-seq
DNase-seq
WGBS
ATAC-seq
FAIRE-seq
pCHi-C
primary cell
endothelial cell of umbilical vein
17
2
1
tissue
spleen
14
1
2
1
1
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