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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
Assay category
58
DNA binding
Target of assay
44
transcription factor
14
histone
14
histone modification
8
broad histone mark
6
narrow histone mark
4
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
58
November, 2017
Available data
582
bam
522
bigWig
427
fastq
404
bed narrowPeak
355
bigBed narrowPeak
119
tsv
59
bed broadPeak
59
bigBed broadPeak
20
tagAlign
bed bed3+
3
tar
2
bedpe bed3+
2
hic
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
1
txt
1
vcf
Organism
58
Homo sapiens
Biosample type
58
cell line
37
tissue
22
primary cell
1
in vitro differentiated cells
Organ
58
liver
Project
58
AMP
Genome assembly (visualization)
58
hg19
44
GRCh38
Lab
58
AMP-T2D consortium
Audit category:
13
inconsistent control read length
assay_title!
HiChIP
small RNA-seq
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
cell line
HepG2
58
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