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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
snATAC-seq
17
pCHi-C
11
ATAC-seq
total RNA-seq
3
CRISPR genome editing followed by DNA sequencing
HiChIP
Assay category
29
DNA accessibility
Date released
17
May, 2021
16
February, 2023
16
January, 2021
Organism
49
Homo sapiens
Biosample type
24
primary cell
22
tissue
3
cell line
Organ
21
pancreas
8
blood
8
bodily fluid
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
1119
AMP
229
HPAP
49
T1D
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
88
GRCh38
hg19
Lab
49
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
assay_title!
HiChIP
total RNA-seq
assembly!
hg19
BIOSAMPLE
ASSAY
49 results
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snATAC-seq
pCHi-C
ATAC-seq
CRISPR genome editing followed by DNA sequencing
primary cell
peripheral blood mononuclear cell
8
CD4-positive, alpha-beta T cell
2
B cell
1
CD8-positive, alpha-beta T cell
1
activated CD4-positive, alpha-beta T cell
1
+ See 11 more…
tissue
islet of Langerhans
6
11
pancreas
4
thymus
1
cell line
EndoC_BH1
3
See all biosamples