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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
total RNA-seq
47
ChIP-seq
36
DNase-seq
10
ATAC-seq
1
WGBS
Assay category
62
Transcription
47
DNA binding
46
DNA accessibility
1
DNA methylation
Target of assay
47
histone
47
histone modification
34
broad histone mark
13
narrow histone mark
Date released
66
February, 2021
52
October, 2019
32
June, 2019
5
May, 2019
1
July, 2019
Available data
156
bam
148
bigWig
93
bed narrowPeak
83
bigBed narrowPeak
62
tsv
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
156
Homo sapiens
Biosample type
156
tissue
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
294
epithelium
266
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
0
gonad
Project
156
AMP
Genome assembly (visualization)
160
hg19
156
GRCh38
Lab
156
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
HiChIP
BIOSAMPLE
ASSAY
156 results
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total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
WGBS
tissue
bone tissue
58
tibial nerve
4
24
2
1
tibial artery
18
2
1
muscle of leg
5
13
1
muscle of arm
17
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