Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
Assay category
50
DNA binding
Target of assay
25
histone
25
histone modification
25
transcription factor
13
chromatin remodeller
13
narrow histone mark
12
broad histone mark
6
RNA binding protein
1
recombinant protein
Date released
21
November, 2017
11
August, 2017
11
December, 2017
5
November, 2018
2
February, 2018
Available data
50
bam
50
bigWig
50
fastq
48
bed narrowPeak
25
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
11
tagAlign
10
bed bed3+
Organism
50
Homo sapiens
Biosample type
26
cell line
17
in vitro differentiated cells
tissue
5
primary cell
2
stem cell
Organ
26
liver
6
connective tissue
5
epithelium
4
pancreas
3
embryo
Project
50
AMP
Genome assembly (visualization)
50
hg19
46
GRCh38
Lab
50
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
50
inconsistent control read length
9
inconsistent control run_type
2
inconsistent assembly
assay_title!
HiChIP
biosample_type!
tissue
files.file_type!
hdf5
BIOSAMPLE
ASSAY
50 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
26
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
4
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
+ See 1 more…
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
stem cell
hESC
2
See all biosamples
Download