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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
36
DNase-seq
4
total RNA-seq
2
ATAC-seq
1
WGBS
Assay category
48
DNA binding
38
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
48
histone
48
histone modification
34
broad histone mark
control
14
narrow histone mark
Date released
52
October, 2019
32
June, 2019
6
May, 2019
1
July, 2019
Available data
91
bam
91
bigWig
86
bed narrowPeak
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
91
Homo sapiens
Biosample type
91
tissue
Organ
647
pancreas
580
liver
565
connective tissue
423
adipose tissue
290
epithelium
213
brain
191
heart
163
vasculature
159
blood vessel
132
kidney
97
limb
93
artery
66
bone element
54
blood
54
bodily fluid
54
musculature of body
31
nerve
29
embryo
18
ureter
18
vein
16
spleen
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
91
AMP
Genome assembly (visualization)
90
GRCh38
90
hg19
Lab
91
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
HiChIP
organ_slims!
skeleton
target.investigated_as!
control
BIOSAMPLE
ASSAY
91 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial nerve
24
2
4
1
tibial artery
18
2
1
muscle of leg
6
13
1
muscle of arm
17
forelimb muscle
1
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