Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
RRBS
16
WGBS
3
ChIP-seq
1
FAIRE-seq
Assay category
32
DNA methylation
3
DNA binding
1
DNA accessibility
Target of assay
3
transcription factor
1
RNA binding protein
Date released
21
July, 2019
7
November, 2018
4
August, 2017
3
November, 2017
1
October, 2019
Available data
2936
bam
2672
bigWig
1591
tsv
1339
bed narrowPeak
1246
fastq
852
bigBed narrowPeak
252
bed broadPeak
238
bigBed broadPeak
226
bed bed3+
214
tagAlign
160
txt
153
zippedFastqFolder
64
xls
32
bed bedMethyl
32
bigBed bedMethyl
21
bedpe bed3+
21
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
vcf
Organism
36
Homo sapiens
Biosample type
22
tissue
10
primary cell
4
cell line
Organ
8
heart
7
epithelium
6
liver
6
pancreas
4
kidney
musculature of body
3
connective tissue
3
vasculature
2
adipose tissue
2
blood vessel
2
brain
2
spleen
1
eye
1
limb
1
pericardium
1
vein
Project
36
AMP
Genome assembly (visualization)
20
hg19
16
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
HiChIP
organ_slims!
musculature of body
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
36 results
search-icon
table-tab-icon
Clear Filters
RRBS
WGBS
ChIP-seq
FAIRE-seq
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 9 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
endothelial cell of umbilical vein
1
epithelial cell of proximal tubule
1
+ See 5 more…
cell line
HepG2
1
3
See all biosamples
Download