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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
33
single cell RNA-seq
21
snATAC-seq
Assay category
60
DNA accessibility
41
DNA methylation
33
Transcription
Date released
134
May, 2022
September, 2020
Available data
3377
bam
3152
bigWig
1805
bed narrowPeak
1600
tsv
1300
fastq
1036
bigBed narrowPeak
384
tagAlign
318
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
134
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
134
Homo sapiens
Biosample type
134
primary cell
Organ
80
epithelium
80
pancreas
Project
134
HPAP
Lab
134
Klaus Kaestner, Upenn
assay_title!
HiChIP
month_released!
October, 2017
September, 2020
BIOSAMPLE
ASSAY
134 results
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WGBS
ATAC-seq
single cell RNA-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
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