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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
DNase-seq
4
ATAC-seq
4
total RNA-seq
1
pCHi-C
Assay category
22
DNA accessibility
4
Transcription
Date released
February, 2021
18
June, 2019
8
February, 2023
1
May, 2021
Available data
18
bam
18
bed bed3+
18
bed broadPeak
18
bed narrowPeak
18
bigBed broadPeak
18
bigBed narrowPeak
18
bigWig
4
bed bed3
4
txt
Organism
27
Homo sapiens
Biosample type
26
tissue
1
primary cell
Organ
907
pancreas
735
liver
492
epithelium
346
kidney
327
heart
284
brain
228
connective tissue
170
vasculature
164
blood vessel
116
limb
104
adipose tissue
96
musculature of body
75
artery
61
eye
54
blood
54
bodily fluid
43
nerve
37
embryo
22
vein
20
lung
18
ureter
16
spleen
9
bone element
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
26
AMP
1
T1D
Genome assembly (visualization)
22
hg19
18
GRCh38
Lab
26
AMP-T2D consortium
1
Kyle Gaulton, UCSD
assay_title!
HiChIP
month_released!
February, 2021
November, 2018
BIOSAMPLE
ASSAY
27 results
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DNase-seq
ATAC-seq
total RNA-seq
pCHi-C
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
acetabular part of hip bone
1
1
ilium
1
1
+ See 2 more…
primary cell
megakaryocyte
1
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