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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
36
DNase-seq
7
total RNA-seq
2
ATAC-seq
1
pCHi-C
Assay category
70
DNA binding
38
DNA accessibility
7
Transcription
Target of assay
53
histone
53
histone modification
34
broad histone mark
19
narrow histone mark
17
control
Date released
73
October, 2019
32
June, 2019
7
May, 2019
July, 2019
3
February, 2020
1
March, 2020
Available data
107
bam
90
bigWig
86
bed narrowPeak
84
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
8
tsv
Organism
116
Homo sapiens
Biosample type
116
tissue
Organ
940
pancreas
781
liver
666
connective tissue
511
epithelium
479
adipose tissue
368
heart
343
kidney
268
brain
224
vasculature
219
blood vessel
159
bone element
138
artery
117
limb
86
musculature of body
69
blood
69
bodily fluid
60
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
116
AMP
Genome assembly (visualization)
90
hg19
89
GRCh38
Lab
116
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
HiChIP
month_released!
July, 2019
organ_slims!
skeleton
BIOSAMPLE
ASSAY
116 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
pCHi-C
tissue
tibial nerve
35
2
5
1
tibial artery
23
2
1
1
muscle of leg
7
13
muscle of arm
17
islet of Langerhans
5
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