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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
129
ChIP-seq
5
ATAC-seq
4
DNase-seq
1
FAIRE-seq
Assay category
129
DNA binding
10
DNA accessibility
Target of assay
105
histone modification
104
histone
54
broad histone mark
49
narrow histone mark
24
transcription factor
7
RNA binding protein
3
chromatin remodeller
Date released
313
November, 2017
210
June, 2019
189
October, 2019
139
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
284
fastq
279
bam
269
bigWig
139
bed narrowPeak
89
tsv
83
tagAlign
39
bed broadPeak
39
bigBed narrowPeak
33
bed bed3+
14
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
134
Homo sapiens
Biosample type
65
tissue
43
in vitro differentiated cells
31
primary cell
Organ
48
pancreas
46
connective tissue
18
liver
17
epithelium
13
musculature of body
3
adipose tissue
Project
139
AMP
Genome assembly (visualization)
139
hg19
115
GRCh38
Lab
139
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
16
inconsistent control read length
inconsistent assembly
1
inconsistent control run_type
assay_title!
MPRA
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
139 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
18
1
1
liver
17
skeletal muscle tissue
13
pancreas
11
adipose tissue
1
+ See 3 more…
in vitro differentiated cells
adipocyte
42
1
primary cell
skeletal muscle myoblast
12
2
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
See all biosamples
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