Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
total RNA-seq
85
single cell RNA-seq
48
snATAC-seq
47
WGBS
42
ATAC-seq
3
Hi-C
Assay category
177
Transcription
90
DNA accessibility
47
DNA methylation
3
3D chromatin structure
Date released
134
May, 2022
76
February, 2023
59
September, 2020
45
February, 2021
August, 2020
3
October, 2022
Available data
162
fastq
153
zippedFastqFolder
6
tsv
3
bedpe bed3+
3
bigWig
3
cool
3
hic
Organism
317
Homo sapiens
Biosample type
317
primary cell
Organ
145
epithelium
145
pancreas
Project
4286
AMP
317
HPAP
244
T1D
47
KPMP
19
LungMap
4
community
1
ITG
Genome assembly (visualization)
3
GRCh38
3
hg19
Lab
317
Klaus Kaestner, Upenn
Audit category:
30
audit script error
assay_title!
MPRA
month_released!
August, 2020
target.investigated_as!
other context
BIOSAMPLE
ASSAY
317 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
snATAC-seq
WGBS
ATAC-seq
Hi-C
primary cell
Langerhans cell
85
48
pancreatic alpha cell
42
31
24
1
pancreatic beta cell
11
16
14
1
exocrine cell
39
pancreatic acinar cell
4
1
Download