Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
3
ChIP-seq
2
ATAC-seq
2
pCHi-C
2
total RNA-seq
Assay category
10
3D chromatin structure
3
DNA binding
2
DNA accessibility
2
Transcription
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
406
November, 2017
290
October, 2019
289
August, 2017
224
May, 2021
199
May, 2022
191
August, 2021
185
February, 2023
154
February, 2021
152
May, 2020
120
May, 2019
80
April, 2019
79
December, 2017
74
October, 2018
71
November, 2018
59
September, 2020
47
September, 2018
47
September, 2023
41
November, 2019
40
May, 2024
39
July, 2019
31
June, 2019
28
December, 2018
24
February, 2018
22
October, 2017
19
April, 2020
19
March, 2020
18
January, 2019
16
January, 2021
15
May, 2023
11
November, 2020
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
July, 2018
3
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
tsv
20
bigWig
16
bam
12
bedpe bed3+
10
hic
3
bed narrowPeak
2
ibed
Organism
19
Homo sapiens
Biosample type
12
tissue
4
in vitro differentiated cells
2
cell line
1
primary cell
Organ
8
pancreas
3
epithelium
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
14
AMP
5
T1D
Genome assembly (visualization)
17
hg19
3
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
assay_title!
MPRA
files.file_type!
bed bed3+
tsv
organ_slims!
spleen
BIOSAMPLE
ASSAY
19 results
search-icon
table-tab-icon
Clear Filters
Hi-C
ChIP-seq
ATAC-seq
pCHi-C
total RNA-seq
tissue
islet of Langerhans
2
1
2
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
cell line
EndoC_BH1
1
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
Download