Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
17
histone
17
histone modification
15
transcription factor
9
narrow histone mark
8
broad histone mark
7
chromatin remodeller
1
RNA binding protein
Date released
November, 2017
16
August, 2017
9
December, 2017
5
November, 2018
2
February, 2018
October, 2018
Available data
32
bam
32
bed narrowPeak
32
bigWig
32
fastq
11
bigBed narrowPeak
8
bed bed3+
Organism
32
Homo sapiens
Biosample type
17
in vitro differentiated cells
5
cell line
5
primary cell
5
tissue
stem cell
Organ
8
pancreas
6
connective tissue
6
liver
5
epithelium
3
embryo
Project
32
AMP
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
32
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
32
inconsistent control read length
5
inconsistent control run_type
4
inconsistent assembly
assay_title!
MeRIP-seq
biosample_type!
stem cell
month_released!
November, 2017
October, 2018
BIOSAMPLE
ASSAY
32 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
4
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
+ See 1 more…
cell line
HepG2
5
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
skeletal muscle myoblast
1
tissue
pancreas
4
liver
1
See all biosamples
Download