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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
2
pCHi-C
2
single cell RNA-seq
Assay category
122
Transcription
Date released
79
May, 2021
22
February, 2021
15
February, 2018
August, 2021
4
March, 2020
2
December, 2019
2
October, 2019
Available data
254
bam
237
bigWig
141
fastq
124
tsv
107
bed narrowPeak
23
bed bed3+
20
tagAlign
17
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
124
Homo sapiens
Biosample type
977
tissue
270
primary cell
124
in vitro differentiated cells
102
cell line
4
stem cell
Organ
6
embryo
5
connective tissue
2
epithelium
1
heart
Project
124
AMP
Genome assembly (visualization)
120
GRCh38
120
hg19
Lab
124
AMP-T2D consortium
Audit category:
90
inconsistent ontology term
2
audit script error
assay_title!
MeRIP-seq
month_released!
August, 2021
BIOSAMPLE
ASSAY
124 results
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total RNA-seq
pCHi-C
single cell RNA-seq
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
induced pluripotent stem cell
9
cardiomyocytes (cardiac muscle cell)
3
1
2
adipocyte
4
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