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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ATAC-seq
60
total RNA-seq
8
RRBS
2
small RNA-seq
1
Hi-C
Assay category
100
DNA accessibility
62
Transcription
8
DNA methylation
1
3D chromatin structure
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
50
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
24
July, 2019
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
106
bigWig
105
bam
60
tsv
8
bed bedMethyl
8
bigBed bedMethyl
1
bed bed3+
1
hdf5
Organism
171
Homo sapiens
Biosample type
259
tissue
171
primary cell
1
cell line
Organ
13
epithelium
8
connective tissue
brain
7
kidney
5
heart
5
vasculature
4
blood vessel
3
musculature of body
2
adipose tissue
2
artery
2
liver
1
eye
1
pericardium
Project
126
AMP
45
T1D
Genome assembly (visualization)
114
hg19
60
GRCh38
Lab
126
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
assay_title!
MeRIP-seq
organ_slims!
brain
BIOSAMPLE
ASSAY
171 results
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ATAC-seq
total RNA-seq
RRBS
small RNA-seq
Hi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
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