Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
149
DNase-seq
28
ChIP-seq
1
snATAC-seq
Assay category
150
DNA accessibility
28
DNA binding
Target of assay
13
transcription factor
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
3
control
2
RNA binding protein
Date released
136
June, 2019
26
August, 2017
9
November, 2018
4
October, 2019
2
September, 2017
1
May, 2022
Available data
1709
bam
1557
bigWig
907
tsv
803
bed narrowPeak
473
bigBed narrowPeak
377
fastq
238
tagAlign
186
bed broadPeak
178
bed bed3+
149
bigBed broadPeak
69
txt
64
xls
18
bed bedMethyl
18
bigBed bedMethyl
8
hic
7
bedpe bed3+
6
csv
1
bed bed3
1
bedpe
1
tagAlign bed3+
Organism
178
Homo sapiens
Biosample type
178
tissue
34
primary cell
25
in vitro differentiated cells
3
cell line
3
stem cell
Organ
68
kidney
36
limb
33
musculature of body
27
brain
heart
27
pancreas
18
ureter
6
adipose tissue
6
connective tissue
6
liver
5
blood vessel
5
vasculature
4
artery
3
eye
2
nerve
1
spleen
Project
178
AMP
Genome assembly (visualization)
177
GRCh38
164
hg19
Lab
178
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
Audit category:
14
missing controlled_by
assay_title!
MeRIP-seq
organ_slims!
bone element
heart
BIOSAMPLE
ASSAY
178 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
snATAC-seq
tissue
islet of Langerhans
21
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 36 more…
See all biosamples
Download