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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
156
total RNA-seq
124
ChIP-seq
79
ATAC-seq
2
snATAC-seq
1
single cell RNA-seq
Assay category
157
Transcription
124
DNA binding
81
DNA accessibility
Target of assay
57
histone
57
histone modification
52
control
38
narrow histone mark
19
broad histone mark
15
transcription factor
11
RNA binding protein
Date released
545
February, 2021
284
August, 2017
242
October, 2019
229
August, 2021
193
May, 2020
163
June, 2019
120
July, 2018
115
May, 2019
95
February, 2023
82
November, 2017
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
48
December, 2017
47
September, 2023
40
March, 2020
40
May, 2021
40
May, 2024
40
November, 2019
26
November, 2018
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
8
January, 2021
7
December, 2018
7
January, 2019
6
April, 2018
6
September, 2017
5
March, 2019
3
December, 2019
2
January, 2018
1
August, 2022
Available data
267
bam
215
bigWig
147
tsv
135
bed narrowPeak
58
fastq
50
tagAlign
45
bigBed narrowPeak
5
bed bed3
4
txt
Organism
362
Homo sapiens
Biosample type
362
tissue
237
primary cell
16
in vitro differentiated cells
7
cell line
Organ
193
liver
69
pancreas
36
heart
35
artery
35
blood vessel
35
vasculature
31
eye
24
adipose tissue
24
connective tissue
14
epithelium
8
bone element
8
skeleton
1
brain
Project
344
AMP
18
T1D
Genome assembly (visualization)
248
hg19
242
GRCh38
Lab
344
AMP-T2D consortium
18
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control read length
assay_title!
MeRIP-seq
BIOSAMPLE
ASSAY
362 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
snATAC-seq
single cell RNA-seq
tissue
liver
143
50
coronary artery
35
body of pancreas
33
islet of Langerhans
5
11
2
retina
2
15
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