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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
205
ChIP-seq
Assay category
205
DNA binding
Target of assay
123
histone
123
histone modification
73
broad histone mark
50
narrow histone mark
47
transcription factor
44
control
RNA binding protein
3
chromatin remodeller
Date released
715
February, 2021
403
August, 2017
394
May, 2021
369
November, 2017
341
May, 2020
318
August, 2021
313
October, 2019
214
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
64
March, 2020
60
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
6
November, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
205
bam
160
bed narrowPeak
160
bigWig
138
bigBed narrowPeak
90
fastq
15
bed bed3+
Organism
205
Homo sapiens
Biosample type
157
tissue
41
in vitro differentiated cells
4
primary cell
3
stem cell
Organ
59
liver
47
blood vessel
47
vasculature
28
brain
21
epithelium
19
heart
13
embryo
7
limb
7
musculature of body
4
artery
4
kidney
2
pancreas
Project
205
AMP
Genome assembly (visualization)
165
hg19
164
GRCh38
Lab
205
AMP-T2D consortium
Audit category:
27
inconsistent control
6
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
assay_title!
MeRIP-seq
files.file_type!
tagAlign bed3+
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
205 results
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Clear Filters
ChIP-seq
tissue
liver
37
ascending aorta
15
temporal lobe
15
thoracic aorta
15
angular gyrus
13
+ See 8 more…
in vitro differentiated cells
hepatocyte
13
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
primary cell
kidney epithelial cell
4
stem cell
hESC
3
See all biosamples
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