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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
12
WGBS
8
Hi-C
6
ATAC-seq
2
FAIRE-seq
Assay category
27
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Date released
406
November, 2017
322
August, 2017
298
October, 2019
226
May, 2021
218
June, 2019
200
May, 2022
189
February, 2023
156
February, 2021
152
May, 2020
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
73
November, 2018
68
August, 2021
59
September, 2020
47
September, 2018
47
September, 2023
43
July, 2019
41
November, 2019
40
May, 2024
24
February, 2018
23
October, 2017
19
April, 2020
19
March, 2020
11
September, 2017
8
December, 2018
8
January, 2021
7
August, 2020
7
January, 2018
7
January, 2019
5
March, 2019
5
March, 2023
4
July, 2018
4
October, 2022
2
November, 2020
1
August, 2018
1
August, 2022
1
December, 2019
1
May, 2023
Available data
85
bigWig
82
bam
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
43
Homo sapiens
Biosample type
30
tissue
13
primary cell
Organ
14
heart
8
epithelium
7
brain
7
vasculature
6
blood vessel
6
musculature of body
5
kidney
5
limb
3
liver
2
connective tissue
2
pancreas
1
artery
1
eye
1
pericardium
Project
43
AMP
Genome assembly (visualization)
26
hg19
14
GRCh38
Lab
43
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
MeRIP-seq
files.file_type!
tsv
lab.title!
Katalin Susztak, Upenn
organ_slims!
blood
BIOSAMPLE
ASSAY
43 results
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Clear Filters
RRBS
WGBS
Hi-C
ATAC-seq
FAIRE-seq
tissue
heart left ventricle
1
4
2
gastrocnemius medialis
4
aorta
2
heart right ventricle
2
kidney
1
1
+ See 13 more…
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
+ See 8 more…
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