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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
total RNA-seq
130
ChIP-seq
100
ATAC-seq
1
pCHi-C
Assay category
145
Transcription
130
DNA binding
100
DNA accessibility
Target of assay
87
histone
87
histone modification
50
narrow histone mark
37
broad histone mark
37
control
6
transcription factor
4
RNA binding protein
Date released
670
February, 2021
411
August, 2017
406
November, 2017
314
October, 2019
296
May, 2020
218
June, 2019
168
July, 2018
164
May, 2021
155
August, 2021
120
May, 2019
108
July, 2019
106
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
22
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
6
November, 2020
4
August, 2018
3
June, 2018
2
May, 2022
1
August, 2022
1
May, 2023
1
October, 2022
Available data
317
bam
280
bigWig
144
tsv
92
bed narrowPeak
64
bigBed narrowPeak
50
tagAlign
Organism
376
Homo sapiens
Biosample type
273
tissue
102
primary cell
1
cell line
Organ
194
liver
57
heart
23
kidney
Project
376
AMP
Genome assembly (visualization)
280
hg19
226
GRCh38
Lab
376
AMP-T2D consortium
45
Kyle Gaulton, UCSD
0
Struan F.A. Grant, CHOP
Audit category:
4
inconsistent ontology term
assay_title!
MeRIP-seq
BIOSAMPLE
ASSAY
376 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
tissue
liver
143
50
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
cell line
HepG2
1
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