Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
45
DNA binding
9
DNA accessibility
Target of assay
39
transcription factor
8
RNA binding protein
8
chromatin remodeller
3
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
November, 2018
8
January, 2021
1
January, 2018
Available data
45
bam
45
fastq
43
bigWig
42
bed narrowPeak
42
bigBed narrowPeak
Organism
54
Homo sapiens
Biosample type
46
cell line
8
primary cell
Organ
926
pancreas
736
liver
682
connective tissue
515
epithelium
489
adipose tissue
393
heart
354
kidney
284
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
61
eye
54
blood
54
bodily fluid
43
nerve
37
embryo
22
vein
20
lung
18
ureter
16
skeleton
16
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
46
AMP
8
T1D
Genome assembly (visualization)
43
hg19
42
GRCh38
Lab
46
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
assay_title!
MeRIP-seq
month_released!
August, 2018
November, 2018
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
54 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
45
1
primary cell
peripheral blood mononuclear cell
8
Download