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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
334
ChIP-seq
152
DNase-seq
Assay category
334
DNA binding
152
DNA accessibility
Target of assay
244
transcription factor
66
recombinant protein
61
control
37
RNA binding protein
26
histone
26
histone modification
15
chromatin remodeller
14
narrow histone mark
12
broad histone mark
2
other context
2
other post-translational modification
Date released
397
May, 2021
341
May, 2020
315
November, 2017
314
August, 2021
286
August, 2017
260
February, 2021
224
October, 2019
200
May, 2022
190
February, 2023
171
June, 2019
166
July, 2018
94
December, 2017
92
May, 2019
85
November, 2018
80
April, 2019
73
July, 2019
73
September, 2018
60
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
19
April, 2020
16
January, 2021
14
May, 2023
11
February, 2020
11
September, 2017
10
December, 2019
7
August, 2020
7
January, 2018
6
October, 2017
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
485
bam
434
bigWig
415
bed narrowPeak
415
bigBed narrowPeak
315
fastq
210
bed broadPeak
210
bigBed broadPeak
152
bed bed3+
12
tagAlign
3
tar
Organism
486
Homo sapiens
Biosample type
315
cell line
137
tissue
34
primary cell
Organ
317
liver
brain
81
kidney
43
musculature of body
35
heart
32
limb
26
epithelium
connective tissue
18
ureter
13
vasculature
8
blood vessel
7
eye
4
pancreas
2
artery
1
adipose tissue
Project
486
AMP
Genome assembly (visualization)
420
hg19
383
GRCh38
Lab
486
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
assay_title!
MeRIP-seq
organ_slims!
brain
connective tissue
BIOSAMPLE
ASSAY
486 results
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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG2
315
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
renal cortex interstitium
11
+ See 20 more…
primary cell
skeletal muscle satellite cell
8
cardiac muscle cell
3
1
epithelial cell of proximal tubule
3
1
retinal pigment epithelial cell
3
1
skeletal muscle cell
2
1
+ See 9 more…
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