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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
4
total RNA-seq
3
DNase-seq
RRBS
Assay category
5
DNA binding
4
Transcription
3
DNA accessibility
Target of assay
2
control
2
histone
2
histone modification
2
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
8
June, 2019
4
July, 2019
Available data
12
bam
10
bigWig
6
bed narrowPeak
6
bigBed narrowPeak
4
tsv
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
Organism
12
Homo sapiens
Biosample type
312
tissue
66
cell line
12
primary cell
1
in vitro differentiated cells
Organ
400
epithelium
346
pancreas
38
connective tissue
36
vasculature
33
kidney
31
blood vessel
22
vein
20
brain
13
liver
13
musculature of body
12
heart
8
blood
8
bodily fluid
4
eye
2
adipose tissue
2
artery
1
bone element
1
bone marrow
1
pericardium
Project
12
AMP
Genome assembly (visualization)
10
GRCh38
9
hg19
Lab
12
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
assay_title!
RNA microarray
RRBS
snDrop-seq
BIOSAMPLE
ASSAY
12 results
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ChIP-seq
total RNA-seq
DNase-seq
primary cell
cardiac fibroblast
5
3
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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