Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
ChIP-seq
single cell RNA-seq
1
snATAC-seq
Assay category
94
DNA binding
1
DNA accessibility
Target of assay
42
transcription factor
31
histone
31
histone modification
21
control
16
narrow histone mark
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
580
February, 2021
411
August, 2017
406
November, 2017
314
October, 2019
296
May, 2020
218
June, 2019
164
May, 2021
120
July, 2018
120
May, 2019
105
July, 2019
102
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
76
October, 2018
72
September, 2018
64
March, 2020
61
November, 2019
52
August, 2021
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
22
October, 2017
11
September, 2017
8
January, 2018
6
November, 2020
5
December, 2019
1
August, 2018
1
August, 2022
1
May, 2022
1
May, 2023
1
October, 2022
Available data
94
bam
94
fastq
72
bed narrowPeak
72
bigWig
50
bigBed narrowPeak
16
bed bed3+
1
txt
Organism
95
Homo sapiens
Biosample type
49
tissue
43
in vitro differentiated cells
3
stem cell
Organ
63
liver
19
epithelium
13
embryo
1
musculature of body
Project
95
AMP
Genome assembly (visualization)
78
hg19
77
GRCh38
Lab
101
Klaus Kaestner, Upenn
95
AMP-T2D consortium
40
Karen Mohlke, UNC
24
Kyle Gaulton, UCSD
Audit category:
27
inconsistent control
4
inconsistent ontology term
1
audit script error
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
assay_title!
RNA microarray
single cell RNA-seq
BIOSAMPLE
ASSAY
95 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
tissue
liver
38
right lobe of liver
10
skeletal muscle tissue
1
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
stem cell
hESC
3
See all biosamples
Download