Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
RNA microarray
59
total RNA-seq
13
single cell RNA-seq
1
MPRA
Assay category
72
Transcription
Date released
57
August, 2021
6
May, 2022
5
February, 2021
4
February, 2023
1
October, 2022
Available data
394
bam
219
bed narrowPeak
190
tsv
181
fastq
160
tagAlign
143
bigWig
79
bigBed narrowPeak
73
txt
64
xls
24
bed broadPeak
23
bed bed3+
23
bigBed broadPeak
17
bed bedMethyl
17
bigBed bedMethyl
8
csv
2
bedpe bed3+
1
hic
1
vcf
0
zippedFastqFolder
Organism
72
Homo sapiens
Biosample type
72
tissue
1
cell line
Organ
62
kidney
6
pancreas
4
bone element
4
skeleton
Project
HPAP
73
AMP
Genome assembly (visualization)
hg19
Lab
57
Katalin Susztak, Upenn
10
AMP-T2D consortium
6
Kyle Gaulton, UCSD
Audit category:
5
audit script error
assay_title!
RNA microarray
assembly!
hg19
award.project!
HPAP
BIOSAMPLE
ASSAY
73 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
single cell RNA-seq
MPRA
tissue
kidney
49
13
islet of Langerhans
6
acetabular part of hip bone
1
ilium
1
ischium
1
+ See 1 more…
cell line
MIN6
1
See all biosamples
Download