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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
DNase-seq
1
ChIP-seq
Assay category
36
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
33
June, 2019
2
August, 2017
1
November, 2018
1
November, 2020
Available data
793
bam
785
bigWig
643
tsv
260
bed narrowPeak
116
bigBed narrowPeak
101
fastq
54
bed bed3+
37
bed broadPeak
36
bigBed broadPeak
28
tagAlign
10
bed bedMethyl
10
bigBed bedMethyl
6
bed bed3
4
bed bedgraph
4
bedpe bed3+
3
hic
1
hdf5
Organism
37
Homo sapiens
Biosample type
30
tissue
6
primary cell
1
in vitro differentiated cells
Organ
78
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
20
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
37
AMP
Genome assembly (visualization)
36
GRCh38
34
hg19
Lab
37
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
RNA microarray
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
37 results
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DNase-seq
ChIP-seq
tissue
heart
18
heart left ventricle
3
coronary artery
2
omental fat pad
2
right atrium auricular region
2
+ See 3 more…
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
in vitro differentiated cells
adipocyte
1
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