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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
RRBS
10
WGBS
Assay category
29
DNA methylation
Date released
23
July, 2019
November, 2018
6
August, 2017
Available data
3062
bigWig
3002
bam
1741
bed narrowPeak
1595
tsv
1105
fastq
966
bigBed narrowPeak
328
tagAlign
311
bed broadPeak
275
bigBed broadPeak
254
bed bed3+
153
zippedFastqFolder
77
txt
64
xls
29
bed bedMethyl
29
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
bed bedgraph
7
csv
4
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
29
Homo sapiens
Biosample type
19
tissue
10
primary cell
Organ
8
heart
6
epithelium
4
kidney
4
musculature of body
3
connective tissue
2
adipose tissue
2
brain
2
liver
2
pancreas
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
29
AMP
Genome assembly (visualization)
19
hg19
10
GRCh38
Lab
29
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
assay_title!
RNA microarray
audit.WARNING.category!
inconsistent assembly
month_released!
November, 2018
target.investigated_as!
control
BIOSAMPLE
ASSAY
29 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
adipose tissue
2
heart right ventricle
2
skeletal muscle tissue
2
aorta
1
+ See 9 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
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