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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
52
total RNA-seq
28
ChIP-seq
10
ATAC-seq
4
DNase-seq
Assay category
52
Transcription
28
DNA binding
14
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
9
control
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
66
February, 2021
22
October, 2019
3
May, 2019
2
June, 2019
1
July, 2019
Available data
94
bam
77
bigWig
68
bed narrowPeak
56
tsv
19
bigBed narrowPeak
6
tagAlign
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
94
Homo sapiens
Biosample type
66
cell line
28
tissue
primary cell
Organ
621
liver
544
connective tissue
459
pancreas
439
adipose tissue
177
heart
135
blood vessel
135
vasculature
124
brain
103
kidney
100
limb
94
artery
66
bone element
61
epithelium
59
blood
59
bodily fluid
42
musculature of body
34
nerve
28
embryo
22
spleen
18
ureter
8
skeleton
3
eye
Project
94
AMP
Genome assembly (visualization)
85
GRCh38
85
hg19
Lab
94
AMP-T2D consortium
assay_title!
RNA microarray
biosample_type!
primary cell
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
94 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
6
8
tissue
tibial artery
19
1
2
coronary artery
3
1
2
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